IN-BIOSx000
2018
Lecture slides
Fundamentals of Molecular biology
High throughput sequencing (HTS)
File formats and data pre-processing
Algorithms
De novo
assembly
Variant calling
Statistical genomics
IN-BIOSx000
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Lecture slides
¶
Fundamentals of Molecular biology
¶
Oct 22: Molecular Biology
High throughput sequencing (HTS)
¶
Oct 22 : HTS - Introduction
Oct 22 : HTS - PacBio
Oct 23 : HTS - Oxford Nanopore
Oct 23 : HTS - Illumina
Oct 23 : HTS - Experimental Design
Oct 23 : HTS - Library preparation
File formats and data pre-processing
¶
Oct 23 : File formats
Oct 24 : Data pre-processing
Algorithms
¶
Oct 24: Algorithms - Mapping
Oct 24: Algorithms - Alignment
De novo
assembly
¶
Oct 25:
De novo
assembly
Variant calling
¶
Oct 30: VC - introduction
Oct 30: VC - basic pipeline
Oct 30: VC - generating reports
Oct 30: VC - VCF
Oct 30: VC - advanced pipeline
Oct 30: VC - functional annotation
Statistical genomics
¶
Nov 01: Statistical genomics
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